4EDA
Structures of monomeric hemagglutinin and its complex with an Fab fragment of a neutralizing antibody that binds to H1 subtype influenza viruses: molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C (A, C) | Hemagglutinin | polymer | 336 | 37341.1 | 2 | UniProt (C5MQE6) Pfam (PF00509) | Influenza A virus | |
2 | B, D (B, D) | Hemagglutinin | polymer | 182 | 20844.1 | 2 | UniProt (C5MQE6) Pfam (PF00509) | Influenza A virus | |
3 | E, F (E, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
4 | G, H, I, J (A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
5 | K, L, M, N (A, B, C, D) | water | water | 18.0 | 63 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 327 (UniProt: C5MQE6)
B, D: 1 - 176 (UniProt: C5MQE6)
PDB | External Database | Details |
---|---|---|
Ala -8 | - | expression tag |
Asp -7 | - | expression tag |
Pro -6 | - | expression tag |
Gly -5 | - | expression tag |
Tyr -4 | - | expression tag |
Leu -3 | - | expression tag |
Leu -2 | - | expression tag |
Glu -1 | - | expression tag |
Phe 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Arg 177 | - | expression tag |
Ser 178 | - | expression tag |
Leu 179 | - | expression tag |
Val 180 | - | expression tag |
Pro 181 | - | expression tag |
Arg 182 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 116370.4 | |
Branched | Number of molecules | 2 |
Total formula weight | 848.8 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 884.8 | |
All* | Total formula weight | 118104.0 |