4DW4
Crystal structure of the glycoprotein Erns from the pestivirus BVDV-1 in complex with 5'-UMP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | E(rns) glycoprotein | polymer | 167 | 19005.5 | 2 | UniProt (Q96662) | Bovine viral diarrhea virus (BVDV) | |
2 | C, F (C, F) | alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 2 | In PDB GlyTouCan (G51945PF) | |||
3 | D, E, H, I (D, E, H, I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
4 | G (G) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G89333WS) | |||
5 | J, O, P (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
6 | K, L, Q (A, B) | SULFATE ION | non-polymer | 96.1 | 3 | Chemie (SO4) | |||
7 | M, N, R, S (A, B) | URIDINE-5'-MONOPHOSPHATE | non-polymer | 324.2 | 4 | Chemie (U5P) | |||
8 | T, U (A, B) | water | water | 18.0 | 265 | Chemie (HOH) |
Sequence modifications
A, B: 3 - 167 (UniProt: Q96662)
PDB | External Database | Details |
---|---|---|
Arg 1 | - | expression tag |
Ser 2 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 38011.0 | |
Branched | Number of molecules | 7 |
Total formula weight | 4592.2 | |
Non-Polymers* | Number of molecules | 10 |
Total formula weight | 2248.5 | |
All* | Total formula weight | 44851.7 |