4DHJ
The structure of a ceOTUB1 ubiquitin aldehyde UBC13~Ub complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, G, K (A, E, I, L) | Ubiquitin thioesterase otubain-like | polymer | 284 | 32322.0 | 4 | UniProt (Q9XVR6) Pfam (PF10275) | Caenorhabditis elegans (nematode) | OTUB1, Deubiquitinating enzyme otubain-like, Ubiquitin-specific-processing protease otubain-like |
| 2 | B, D, H, L (B, F, J, M) | Ubiquitin aldehyde | polymer | 76 | 8560.8 | 4 | UniProt (P0CG48) Pfam (PF00240) | Homo sapiens (human) | |
| 3 | E, M (D, H) | Ubiquitin | polymer | 76 | 8622.9 | 2 | UniProt (P0CG48) Pfam (PF00240) | Homo sapiens (human) | |
| 4 | F, I, J, N (C, K, G, N) | Ubiquitin-conjugating enzyme E2 N | polymer | 152 | 17157.8 | 4 | UniProt (P61088) Pfam (PF00179) | Homo sapiens (human) | Ubc13, Bendless-like ubiquitin-conjugating enzyme, Ubiquitin carrier protein N, Ubiquitin-protein ligase N |
| 5 | AA, O, P, Q, R... (N, A, B, E, F...) | water | water | 18.0 | 309 | Chemie (HOH) |
Sequence modifications
D, H: 501 - 576 (UniProt: P0CG48)
| PDB | External Database | Details |
|---|---|---|
| Cys 576 | Gly 76 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 14 |
| Total formula weight | 249408.4 | |
| All* | Total formula weight | 249408.4 |
