4D5Y
Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 60S RIBOSOMAL PROTEIN UL2 | polymer | 257 | 28088.9 | 1 | UniProt (G1TT27) Pfam (PF00181) Pfam (PF03947) | ORYCTOLAGUS CUNICULUS (RABBIT) | |
| 2 | B (B) | 60S RIBOSOMAL PROTEIN UL3 | polymer | 403 | 46211.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 3 | C (C) | 60S RIBOSOMAL PROTEIN UL4 | polymer | 427 | 47804.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 4 | D (D) | 60S RIBOSOMAL PROTEIN UL18 | polymer | 297 | 34426.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 5 | E (E) | 60S RIBOSOMAL PROTEIN EL6 | polymer | 288 | 32810.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 6 | F (F) | 60S RIBOSOMAL PROTEIN UL30 | polymer | 248 | 29291.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 7 | G (G) | 60S RIBOSOMAL PROTEIN EL8 | polymer | 266 | 30061.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 8 | H (H) | 60S RIBOSOMAL PROTEIN UL6 | polymer | 192 | 21899.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 9 | I (I) | 60S RIBOSOMAL PROTEIN UL16 | polymer | 214 | 24657.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 10 | J (J) | 60S RIBOSOMAL PROTEIN UL5 | polymer | 178 | 20288.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 11 | K (L) | 60S RIBOSOMAL PROTEIN EL13 | polymer | 211 | 24321.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 12 | L (M) | 60S RIBOSOMAL PROTEIN EL14 | polymer | 215 | 23485.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 13 | M (N) | 60S RIBOSOMAL PROTEIN EL15 | polymer | 204 | 24207.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 14 | N (O) | 60S RIBOSOMAL PROTEIN UL13 | polymer | 203 | 23633.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 15 | O (P) | 60S RIBOSOMAL PROTEIN UL22 | polymer | 184 | 21443.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 16 | P (Q) | 60S RIBOSOMAL PROTEIN EL18 | polymer | 188 | 21687.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 17 | Q (R) | 60S RIBOSOMAL PROTEIN UL19 | polymer | 196 | 23535.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 18 | R (S) | 60S RIBOSOMAL PROTEIN EL20 | polymer | 176 | 20808.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 19 | S (T) | 60S RIBOSOMAL PROTEIN EL21 | polymer | 160 | 18610.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 20 | T (U) | 60S RIBOSOMAL PROTEIN EL22 | polymer | 128 | 14813.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 21 | U (V) | 60S RIBOSOMAL PROTEIN UL14 | polymer | 140 | 14892.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 22 | V (W) | 60S RIBOSOMAL PROTEIN EL24 | polymer | 157 | 17825.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 23 | W (X) | 60S RIBOSOMAL PROTEIN UL23 | polymer | 156 | 17740.2 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 24 | X (Y) | 60S RIBOSOMAL PROTEIN UL24 | polymer | 145 | 17303.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 25 | Y (Z) | 60S RIBOSOMAL PROTEIN EL27 | polymer | 136 | 15835.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 26 | Z (a) | 60S RIBOSOMAL PROTEIN UL15 | polymer | 148 | 16604.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 27 | AA (b) | 60S RIBOSOMAL PROTEIN EL29 | polymer | 159 | 17804.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 28 | BA (c) | 60S RIBOSOMAL PROTEIN EL30 | polymer | 115 | 12805.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 29 | CA (d) | 60S RIBOSOMAL PROTEIN EL31 | polymer | 125 | 14494.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 30 | DA (e) | 60S RIBOSOMAL PROTEIN EL32 | polymer | 135 | 15898.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 31 | EA (f) | 60S RIBOSOMAL PROTEIN EL33 | polymer | 110 | 12564.7 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 32 | FA (g) | 60S RIBOSOMAL PROTEIN EL34 | polymer | 117 | 13326.1 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 33 | GA (h) | 60S RIBOSOMAL PROTEIN UL29 | polymer | 123 | 14593.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 34 | HA (i) | 60S RIBOSOMAL PROTEIN EL36 | polymer | 105 | 12290.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 35 | IA (j) | 60S RIBOSOMAL PROTEIN EL37 | polymer | 97 | 11111.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 36 | JA (k) | 60S RIBOSOMAL PROTEIN EL38 | polymer | 70 | 8238.9 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 37 | KA (l) | 60S RIBOSOMAL PROTEIN EL39 | polymer | 51 | 6426.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 38 | LA (m) | 60S RIBOSOMAL PROTEIN EL40 | polymer | 128 | 14758.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 39 | MA (n) | 60S RIBOSOMAL PROTEIN EL41 | polymer | 25 | 3473.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 40 | NA (o) | 60S RIBOSOMAL PROTEIN EL44 | polymer | 106 | 12477.0 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 41 | OA (p) | 60S RIBOSOMAL PROTEIN EL43 | polymer | 92 | 10299.4 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 42 | PA (t) | 60S RIBOSOMAL PROTEIN EL28 | polymer | 137 | 15784.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 43 | QA (u) | 60S RIBOSOMAL PROTEIN UL1 | polymer | 210 | 23174.5 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 44 | RA (2) | 28S Ribosomal RNA | polymer | 5025 | 1625917.6 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 45 | SA (3) | 5.8S Ribosomal RNA | polymer | 194 | 62616.3 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) | ||
| 46 | TA (4) | 5S Ribosomal RNA | polymer | 119 | 38385.8 | 1 | ORYCTOLAGUS CUNICULUS (RABBIT) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 46 |
| Total formula weight | 2578728.2 | |
| All* | Total formula weight | 2578728.2 |
