4D11
GalNAc-T2 crystal soaked with UDP-5SGalNAc, mEA2 peptide and manganese (Lower resolution dataset)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, D, E, F | POLYPEPTIDE GALNAC-TRANSFERASE T2 | polymer | 571 | 64824.7 | 5 | UniProt (Q10471) Pfam (PF00535) Pfam (PF00652) In PDB | HOMO SAPIENS (HUMAN) | |
2 | C | POLYPEPTIDE GALNAC-TRANSFERASE T2 | polymer | 571 | 64854.7 | 1 | UniProt (Q10471) Pfam (PF00535) Pfam (PF00652) In PDB | HOMO SAPIENS (HUMAN) | |
3 | L, O, P, X, Z | PEPTIDE | polymer | 6 | 548.6 | 5 | UniProt (by SIFTS) (Q6FI18) In PDB | HOMO SAPIENS (HUMAN) | |
4 | A, B, C, D, E... | MANGANESE (II) ION | non-polymer | 54.9 | 6 | Chemie (MN) | |||
5 | A, B, D, E | 2-acetamido-2-deoxy-5-thio-alpha-D-galactopyranose | non-polymer | 237.3 | 4 | Chemie (BBK) | |||
6 | F, A, B, C, D... | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 6 | Chemie (UDP) |
Sequence modifications
A, B, D, E, F: 1 - 571 (UniProt: Q10471)
C: 1 - 571 (UniProt: Q10471)
PDB | External Database | Details |
---|---|---|
Asp 516 | Asn 516 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Ser 74 | Gly 74 | conflict |
Asp 516 | Asn 516 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 391721.3 | |
Non-Polymers* | Number of molecules | 16 |
Total formula weight | 3703.7 | |
All* | Total formula weight | 395425.0 |