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4CK1

Interrogating HIV integrase for compounds that bind- a SAMPL challenge

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
INTEGRASEpolymer18320044.72UniProt (Q76353)
Pfam (PF00665)
UniProt (by SIFTS) (P12497)
HUMAN IMMUNODEFICIENCY VIRUS 1
2C, D, E, F, J...
(A, B)
SULFATE IONnon-polymer96.18Chemie (SO4)
3G, O, P
(A, B)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
4H, Q
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
5I, R
(A, B)
(4-CARBOXY-1,3-BENZODIOXOL-5-YL)METHYL-[[2-[(4-METHOXYPHENYL)METHYLCARBAMOYL]PHENYL]METHYL]AZANIUMnon-polymer449.52Chemie (OM1)
6N
(B)
ACETATE IONnon-polymer59.01Chemie (ACT)
7S, T
(A, B)
waterwater18.0127Chemie (HOH)
Sequence modifications
A, B: 50 - 212 (UniProt: Q76353)
PDBExternal DatabaseDetails
Met 30-expression tag
Gly 31-expression tag
Ser 32-expression tag
Ser 33-expression tag
His 34-expression tag
His 35-expression tag
His 36-expression tag
His 37-expression tag
His 38-expression tag
His 39-expression tag
Ser 40-expression tag
Ser 41-expression tag
Gly 42-expression tag
Leu 43-expression tag
Val 44-expression tag
Pro 45-expression tag
Arg 46-expression tag
Gly 47-expression tag
Ser 48-expression tag
His 49-expression tag
Ser 56Cys 56engineered mutation
Asp 139Phe 139engineered mutation
His 185Phe 185engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight40089.3
Non-Polymers*Number of molecules16
Total formula weight1983.6
All*Total formula weight42073.0
*Water molecules are not included.

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PDB entries from 2025-07-23

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