4CEQ
Interrogating HIV integrase for compounds that bind- a SAMPL challenge
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | INTEGRASE | polymer | 183 | 20044.7 | 2 | UniProt (Q76353) Pfam (PF00665) UniProt (by SIFTS) (P12497) | HUMAN IMMUNODEFICIENCY VIRUS 1 | |
2 | C, D, E, I, J... (A, B) | SULFATE ION | non-polymer | 96.1 | 6 | Chemie (SO4) | |||
3 | F (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
4 | G, M (A, B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
5 | H, N (A, B) | (2S)-6-[[[2-(cyclohexylmethylcarbamoyl)phenyl]methyl-methyl-amino]methyl]-2-(3-hydroxy-3-oxopropyl)-2,3-dihydro-1,4-benzodioxine-5-carboxylic acid | non-polymer | 524.6 | 2 | Chemie (QCH) | |||
6 | L (B) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 1 | Chemie (DMS) | |||
7 | O, P (A, B) | water | water | 18.0 | 166 | Chemie (HOH) |
Sequence modifications
A, B: 50 - 212 (UniProt: Q76353)
PDB | External Database | Details |
---|---|---|
Met 30 | - | expression tag |
Gly 31 | - | expression tag |
Ser 32 | - | expression tag |
Ser 33 | - | expression tag |
His 34 | - | expression tag |
His 35 | - | expression tag |
His 36 | - | expression tag |
His 37 | - | expression tag |
His 38 | - | expression tag |
His 39 | - | expression tag |
Ser 40 | - | expression tag |
Ser 41 | - | expression tag |
Gly 42 | - | expression tag |
Leu 43 | - | expression tag |
Val 44 | - | expression tag |
Pro 45 | - | expression tag |
Arg 46 | - | expression tag |
Gly 47 | - | expression tag |
Ser 48 | - | expression tag |
His 49 | - | expression tag |
Ser 56 | Cys 56 | engineered mutation |
Asp 139 | Phe 139 | engineered mutation |
His 185 | Phe 185 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 40089.3 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 1833.7 | |
All* | Total formula weight | 41923.0 |