4CDM

Crystal structure of M. mazei photolyase soaked with synthetic 8-HDF

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A	DEOXYRIBODIPYRIMIDINE PHOTOLYASE	polymer	482	55123.5	1	UniProt (Q8PYK9) Pfam (PF00875) In PDB	METHANOSARCINA MAZEI	CLASS II CPD PHOTOLYASE
2	A	FLAVIN-ADENINE DINUCLEOTIDE	non-polymer		785.5	1	Chemie (FAD)
3	A	1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol	non-polymer		363.3	1	Chemie (FO1)
4	A	SULFATE ION	non-polymer		96.1	4	Chemie (SO4)
5	A	GLYCEROL	non-polymer		92.1	2	Chemie (GOL)
6		water	water		18.0	33	Chemie (HOH)

Sequence modifications

A: 3 - 464 (UniProt: Q8PYK9)

PDB	External Database	Details
Met -17	-	expression tag
Gly -16	-	expression tag
Ser -15	-	expression tag
Ser -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
His -11	-	expression tag
His -10	-	expression tag
His -9	-	expression tag
His -8	-	expression tag
Ser -7	-	expression tag
Ser -6	-	expression tag
Gly -5	-	expression tag
Leu -4	-	expression tag
Val -3	-	expression tag
Pro -2	-	expression tag
Arg -1	-	expression tag
Gly 0	-	expression tag
Ser 1	-	expression tag
His 2	-	expression tag
Thr 377	Met 377	cloning artifact

Contents of the asymmetric unit

Polymers	Number of chains	1
	Total formula weight	55123.5
Non-Polymers*	Number of molecules	8
	Total formula weight	1717.3
All*	Total formula weight	56840.8

*Water molecules are not included.