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4B9D

Crystal Structure of Human NIMA-related Kinase 1 (NEK1) with inhibitor.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
SERINE/THREONINE-PROTEIN KINASE NEK1polymer35039912.12UniProt (Q96PY6)
Pfam (PF00069)
HOMO SAPIENS (HUMAN)NIMA-RELATED KINASE 1, NEVER IN MITOSIS A-RELATED KINASE 1, NIMA-RELATED PROTEIN KINASE 1, RENAL CARCINOMA ANTIGEN NY-REN-55
2C, F
(A, B)
[4-(2-AMINO-4-METHYL-THIAZOL-5-YL)-PYRIMIDIN-2-YL]-(3-NITRO-PHENYL)-AMINEnon-polymer328.32Chemie (CK7)
3D, E, G
(A, B)
CHLORIDE IONnon-polymer35.53Chemie (CL)
4H
(B)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
5I, J
(A, B)
waterwater18.0234Chemie (HOH)
Sequence modifications
A, B: 1 - 328 (UniProt: Q96PY6)
PDBExternal DatabaseDetails
Met -21-expression tag
His -20-expression tag
His -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
Ser -14-expression tag
Ser -13-expression tag
Gly -12-expression tag
Val -11-expression tag
Asp -10-expression tag
Leu -9-expression tag
Gly -8-expression tag
Thr -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Ser 0-expression tag
Ala 162Thr 162engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight79824.1
Non-Polymers*Number of molecules6
Total formula weight825.1
All*Total formula weight80649.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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