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4B4X

Crystal structure of a complex between Actinomadura R39 DD-peptidase and a sulfonamide boronate inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
D-ALANYL-D-ALANINE CARBOXYPEPTIDASEpolymer46647647.04UniProt (P39045)
Pfam (PF02113)
ACTINOMADURA SP R39DD-CARBOXYPEPTIDASE, DD-PEPTIDASE, PENICILLIN-BINDING PROTEIN, PBP
2BA, E, N, U
(D, A, B, C)
trihydroxy{(1S)-1-[(methylsulfonyl)amino]ethyl}borate(1-)non-polymer184.04Chemie (HQZ)
3AA, CA, DA, EA, F...
(C, D, A, B)
SULFATE IONnon-polymer96.124Chemie (SO4)
4GA, HA, J, K
(D, A)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
5KA, LA, MA, NA
(A, B, C, D)
waterwater18.0347Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight190588.0
Non-Polymers*Number of molecules32
Total formula weight3138.7
All*Total formula weight193726.7
*Water molecules are not included.

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PDB entries from 2025-06-18

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