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4AVV

Structure of CPHPC bound to Serum Amyloid P Component

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E
(A, B, C, D, E)
SERUM AMYLOID P-COMPONENTpolymer20423282.55UniProt (P02743)
Pfam (PF00354)
HOMO SAPIENS (HUMAN)SERUM AMYLOID P COMPONENT, SAP, 9.5S ALPHA-1-GLYCOPROTEIN
2F
(F)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.41In PDB
GlyTouCan (G42666HT)
3G
(G)
N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched2224.01In PDB
GlyTouCan (G84467IZ)
4BB, CB, H, I, K...
(E, A, B)
ACETATE IONnon-polymer59.08Chemie (ACT)
5HA, J, NA, UA, V
(C, A, D, E, B)
(2R)-1-[6-[(2R)-2-carboxypyrrolidin-1-yl]-6-oxidanylidene-hexanoyl]pyrrolidine-2-carboxylic acidnon-polymer340.45Chemie (GHE)
6AA, CA, DA, DB, EA...
(B, E, C, A, D)
CADMIUM IONnon-polymer112.435Chemie (CD)
7AB, JA, Q
(E, C, A)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
8BA
(B)
N-acetyl-alpha-neuraminic acidnon-polymer309.31Chemie (SIA)
9HB, IB, JB, KB, LB
(A, B, C, D, E)
waterwater18.01401Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight116412.3
BranchedNumber of molecules2
Total formula weight2648.4
Non-Polymers*Number of molecules52
Total formula weight7081.5
All*Total formula weight126142.2
*Water molecules are not included.

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PDB entries from 2024-10-30

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