4AQY
Structure of ribosome-apramycin complexes
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | 16S RIBOSOMAL RNA | polymer | 1522 | 493958.3 | 1 | GenBank (155076) | THERMUS THERMOPHILUS | |
| 2 | B (B) | 30S RIBOSOMAL PROTEIN S2 | polymer | 256 | 29317.7 | 1 | GenBank (13446664) Pfam (PF00318) UniProt (by SIFTS) (P80371) | THERMUS THERMOPHILUS | |
| 3 | C (C) | 30S RIBOSOMAL PROTEIN S3 | polymer | 239 | 26751.1 | 1 | GenBank (13446666) Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (P80372) | THERMUS THERMOPHILUS | |
| 4 | D (D) | 30S RIBOSOMAL PROTEIN S4 | polymer | 208 | 24242.3 | 1 | UniProt (P80373) Pfam (PF00163) Pfam (PF01479) | THERMUS THERMOPHILUS | |
| 5 | E (E) | 30S RIBOSOMAL PROTEIN S5 | polymer | 161 | 17452.2 | 1 | UniProt (P27152) Pfam (PF00333) Pfam (PF03719) UniProt (by SIFTS) (Q5SHQ5) | THERMUS THERMOPHILUS | |
| 6 | F (F) | 30S RIBOSOMAL PROTEIN S6 | polymer | 101 | 11988.8 | 1 | UniProt (P23370) Pfam (PF01250) UniProt (by SIFTS) (Q5SLP8) | THERMUS THERMOPHILUS | |
| 7 | G (G) | 30S RIBOSOMAL PROTEIN S7 | polymer | 155 | 17919.8 | 1 | UniProt (P17291) Pfam (PF00177) | THERMUS THERMOPHILUS | |
| 8 | H (H) | 30S RIBOSOMAL PROTEIN S8 | polymer | 138 | 15868.6 | 1 | UniProt (P24319) Pfam (PF00410) UniProt (by SIFTS) (P0DOY9) | THERMUS THERMOPHILUS | |
| 9 | I (I) | 30S RIBOSOMAL PROTEIN S9 | polymer | 128 | 14429.7 | 1 | GenBank (13446668) Pfam (PF00380) UniProt (by SIFTS) (P80374) | THERMUS THERMOPHILUS | |
| 10 | J (J) | 30S RIBOSOMAL PROTEIN S10 | polymer | 104 | 11823.8 | 1 | UniProt (P80375) Pfam (PF00338) UniProt (by SIFTS) (Q5SHN7) | THERMUS THERMOPHILUS | |
| 11 | K (K) | 30S RIBOSOMAL PROTEIN S11 | polymer | 129 | 13737.9 | 1 | GenBank (4519421) Pfam (PF00411) UniProt (by SIFTS) (P80376) | THERMUS THERMOPHILUS | |
| 12 | L (L) | 30S RIBOSOMAL PROTEIN S12 | polymer | 135 | 14920.8 | 1 | UniProt (P17293) Pfam (PF00164) UniProt (by SIFTS) (Q5SHN3) | THERMUS THERMOPHILUS | |
| 13 | M (M) | 30S RIBOSOMAL PROTEIN S13 | polymer | 126 | 14338.9 | 1 | GenBank (4519420) Pfam (PF00416) UniProt (by SIFTS) (P80377) | THERMUS THERMOPHILUS | |
| 14 | N (N) | 30S RIBOSOMAL PROTEIN S14 | polymer | 60 | 7027.5 | 1 | UniProt (P24320) Pfam (PF00253) UniProt (by SIFTS) (P0DOY6) | THERMUS THERMOPHILUS | |
| 15 | O (O) | 30S RIBOSOMAL PROTEIN S15 | polymer | 88 | 10447.2 | 1 | UniProt (P80378) Pfam (PF00312) UniProt (by SIFTS) (Q5SJ76) | THERMUS THERMOPHILUS | |
| 16 | P (P) | 30S RIBOSOMAL PROTEIN S16 | polymer | 88 | 10410.0 | 1 | UniProt (P80379) Pfam (PF00886) UniProt (by SIFTS) (Q5SJH3) | THERMUS THERMOPHILUS | |
| 17 | Q (Q) | 30S RIBOSOMAL PROTEIN S17 | polymer | 104 | 12193.5 | 1 | UniProt (P24321) Pfam (PF00366) UniProt (by SIFTS) (P0DOY7) | THERMUS THERMOPHILUS | |
| 18 | R (R) | 30S RIBOSOMAL PROTEIN S18 | polymer | 88 | 10244.3 | 1 | GenBank (6739549) Pfam (PF01084) UniProt (by SIFTS) (Q5SLQ0) | THERMUS THERMOPHILUS | |
| 19 | S (S) | 30S RIBOSOMAL PROTEIN S19 | polymer | 92 | 10474.3 | 1 | UniProt (P80381) Pfam (PF00203) UniProt (by SIFTS) (Q5SHP2) | THERMUS THERMOPHILUS | |
| 20 | T (T) | 30S RIBOSOMAL PROTEIN S20 | polymer | 106 | 11722.1 | 1 | GenBank (11125386) Pfam (PF01649) UniProt (by SIFTS) (P80380) | THERMUS THERMOPHILUS | |
| 21 | U (V) | 30S RIBOSOMAL PROTEIN THX | polymer | 26 | 3218.8 | 1 | UniProt (P32193) Pfam (PF17070) UniProt (by SIFTS) (Q5SIH3) | THERMUS THERMOPHILUS | |
| 22 | V (W) | 5'-R(*UP*UP*CP*AP*AP*AP)-3' | polymer | 6 | 1860.2 | 1 | THERMUS THERMOPHILUS | MRNA | |
| 23 | W (Z) | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3' | polymer | 15 | 4815.9 | 1 | THERMUS THERMOPHILUS | ANTICODON STEM LOOP ASL | |
| 24 | AA, AB, AC, AD, AE... (A, F, G, H, J...) | MAGNESIUM ION | non-polymer | 24.3 | 203 | Chemie (MG) | |||
| 25 | AF, BF, CF, DF, EF... (A, V) | POTASSIUM ION | non-polymer | 39.1 | 15 | Chemie (K) | |||
| 26 | SH, TH, UH, VH, WH (A) | APRAMYCIN | non-polymer | 539.6 | 5 | Chemie (AM2) | |||
| 27 | II, YH (N, D) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 28 | OI (A) | water | water | 18.0 | 1 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 23 |
| Total formula weight | 789163.4 | |
| Non-Polymers* | Number of molecules | 225 |
| Total formula weight | 8349.1 | |
| All* | Total formula weight | 797512.4 |
