4AQY
Structure of ribosome-apramycin complexes
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | 16S RIBOSOMAL RNA | polymer | 1522 | 493958.3 | 1 | GenBank (155076) | THERMUS THERMOPHILUS | |
2 | B | 30S RIBOSOMAL PROTEIN S2 | polymer | 256 | 29317.7 | 1 | GenBank (13446664) Pfam (PF00318) UniProt (by SIFTS) (P80371) In PDB | THERMUS THERMOPHILUS | |
3 | C | 30S RIBOSOMAL PROTEIN S3 | polymer | 239 | 26751.1 | 1 | GenBank (13446666) Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (P80372) In PDB | THERMUS THERMOPHILUS | |
4 | D | 30S RIBOSOMAL PROTEIN S4 | polymer | 208 | 24242.3 | 1 | UniProt (P80373) Pfam (PF00163) Pfam (PF01479) In PDB | THERMUS THERMOPHILUS | |
5 | E | 30S RIBOSOMAL PROTEIN S5 | polymer | 161 | 17452.2 | 1 | UniProt (P27152) Pfam (PF00333) Pfam (PF03719) UniProt (by SIFTS) (Q5SHQ5) In PDB | THERMUS THERMOPHILUS | |
6 | F | 30S RIBOSOMAL PROTEIN S6 | polymer | 101 | 11988.8 | 1 | UniProt (P23370) Pfam (PF01250) UniProt (by SIFTS) (Q5SLP8) In PDB | THERMUS THERMOPHILUS | |
7 | G | 30S RIBOSOMAL PROTEIN S7 | polymer | 155 | 17919.8 | 1 | UniProt (P17291) Pfam (PF00177) In PDB | THERMUS THERMOPHILUS | |
8 | H | 30S RIBOSOMAL PROTEIN S8 | polymer | 138 | 15868.6 | 1 | UniProt (P24319) Pfam (PF00410) UniProt (by SIFTS) (P0DOY9) In PDB | THERMUS THERMOPHILUS | |
9 | I | 30S RIBOSOMAL PROTEIN S9 | polymer | 128 | 14429.7 | 1 | GenBank (13446668) Pfam (PF00380) UniProt (by SIFTS) (P80374) In PDB | THERMUS THERMOPHILUS | |
10 | J | 30S RIBOSOMAL PROTEIN S10 | polymer | 104 | 11823.8 | 1 | UniProt (P80375) Pfam (PF00338) UniProt (by SIFTS) (Q5SHN7) In PDB | THERMUS THERMOPHILUS | |
11 | K | 30S RIBOSOMAL PROTEIN S11 | polymer | 129 | 13737.9 | 1 | GenBank (4519421) Pfam (PF00411) UniProt (by SIFTS) (P80376) In PDB | THERMUS THERMOPHILUS | |
12 | L | 30S RIBOSOMAL PROTEIN S12 | polymer | 135 | 14920.8 | 1 | UniProt (P17293) Pfam (PF00164) UniProt (by SIFTS) (Q5SHN3) In PDB | THERMUS THERMOPHILUS | |
13 | M | 30S RIBOSOMAL PROTEIN S13 | polymer | 126 | 14338.9 | 1 | GenBank (4519420) Pfam (PF00416) UniProt (by SIFTS) (P80377) In PDB | THERMUS THERMOPHILUS | |
14 | N | 30S RIBOSOMAL PROTEIN S14 | polymer | 60 | 7027.5 | 1 | UniProt (P24320) Pfam (PF00253) UniProt (by SIFTS) (P0DOY6) In PDB | THERMUS THERMOPHILUS | |
15 | O | 30S RIBOSOMAL PROTEIN S15 | polymer | 88 | 10447.2 | 1 | UniProt (P80378) Pfam (PF00312) UniProt (by SIFTS) (Q5SJ76) In PDB | THERMUS THERMOPHILUS | |
16 | P | 30S RIBOSOMAL PROTEIN S16 | polymer | 88 | 10410.0 | 1 | UniProt (P80379) Pfam (PF00886) UniProt (by SIFTS) (Q5SJH3) In PDB | THERMUS THERMOPHILUS | |
17 | Q | 30S RIBOSOMAL PROTEIN S17 | polymer | 104 | 12193.5 | 1 | UniProt (P24321) Pfam (PF00366) UniProt (by SIFTS) (P0DOY7) In PDB | THERMUS THERMOPHILUS | |
18 | R | 30S RIBOSOMAL PROTEIN S18 | polymer | 88 | 10244.3 | 1 | GenBank (6739549) Pfam (PF01084) UniProt (by SIFTS) (Q5SLQ0) In PDB | THERMUS THERMOPHILUS | |
19 | S | 30S RIBOSOMAL PROTEIN S19 | polymer | 92 | 10474.3 | 1 | UniProt (P80381) Pfam (PF00203) UniProt (by SIFTS) (Q5SHP2) In PDB | THERMUS THERMOPHILUS | |
20 | T | 30S RIBOSOMAL PROTEIN S20 | polymer | 106 | 11722.1 | 1 | GenBank (11125386) Pfam (PF01649) UniProt (by SIFTS) (P80380) In PDB | THERMUS THERMOPHILUS | |
21 | V | 30S RIBOSOMAL PROTEIN THX | polymer | 26 | 3218.8 | 1 | UniProt (P32193) Pfam (PF17070) UniProt (by SIFTS) (Q5SIH3) In PDB | THERMUS THERMOPHILUS | |
22 | W | 5'-R(*UP*UP*CP*AP*AP*AP)-3' | polymer | 6 | 1860.2 | 1 | THERMUS THERMOPHILUS | MRNA | |
23 | Z | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3' | polymer | 15 | 4815.9 | 1 | THERMUS THERMOPHILUS | ANTICODON STEM LOOP ASL | |
24 | A, F, G, H, J... | MAGNESIUM ION | non-polymer | 24.3 | 203 | Chemie (MG) | |||
25 | A, V | POTASSIUM ION | non-polymer | 39.1 | 15 | Chemie (K) | |||
26 | A | APRAMYCIN | non-polymer | 539.6 | 5 | Chemie (AM2) | |||
27 | N, D | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
28 | water | water | 18.0 | 1 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 23 |
Total formula weight | 789163.4 | |
Non-Polymers* | Number of molecules | 225 |
Total formula weight | 8349.1 | |
All* | Total formula weight | 797512.4 |