4ADF
CRYSTAL STRUCTURE OF THE HUMAN COLONY-STIMULATING FACTOR 1 (hCSF-1) CYTOKINE IN COMPLEX WITH THE VIRAL RECEPTOR BARF1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | SECRETED PROTEIN BARF1 | polymer | 208 | 23412.7 | 12 | UniProt (P0CW72) Pfam (PF22305) UniProt (by SIFTS) (P03228) In PDB | HUMAN HERPESVIRUS 4 | BARF1,33 KDA EARLY PROTEIN, P33 |
2 | G, H, I, J, K... | MACROPHAGE COLONY-STIMULATING FACTOR 1 | polymer | 153 | 17868.2 | 12 | UniProt (P09603) Pfam (PF05337) In PDB | HOMO SAPIENS (HUMAN) | HCSF-1, CSF-1, M-CSF, MCSF, LANIMOSTIM, PROCESSED MACROPHAGE COLONY-STIMULATING FACTOR 1 |
3 | e, f, h, Y | alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 4 | In PDB GlyTouCan (G34442SS) | |||
4 | a, i, j, Z | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 4 | In PDB GlyTouCan (G55220VL) | |||
5 | b, c, d, g | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 4 | In PDB GlyTouCan (G22768VO) |
Sequence modifications
A, B, C, D, E, F, M, N, O, P, Q, R: 21 - 221 (UniProt: P0CW72)
G, H, I, J, K, L, S, T, U, V, W, X: 1 - 149 (UniProt: P09603)
PDB | External Database | Details |
---|---|---|
Lys 222 | - | expression tag |
His 223 | - | expression tag |
His 224 | - | expression tag |
His 225 | - | expression tag |
His 226 | - | expression tag |
His 227 | - | expression tag |
His 228 | - | expression tag |
Ser 169 | Thr 169 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
His -1 | - | expression tag |
Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 24 |
Total formula weight | 495370.5 | |
Branched | Number of molecules | 12 |
Total formula weight | 12875.6 | |
All* | Total formula weight | 508246.0 |