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3ZT2

Small molecule inhibitors of the LEDGF site of HIV type 1 integrase identified by fragment screening and structure based drug design

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
INTEGRASEpolymer16718395.82UniProt (Q76353)
Pfam (PF00665)
UniProt (by SIFTS) (P12497)
HUMAN IMMUNODEFICIENCY VIRUS
2C, D, E, K, L...
(A, B)
SULFATE IONnon-polymer96.16Chemie (SO4)
3F, G, H, N
(A, B)
ACETATE IONnon-polymer59.04Chemie (ACT)
4I, J, O, P
(A, B)
5-[(E)-(2-OXO-2,3-DIHYDRO-1H-INDEN-1-YLIDENE)METHYL]-1,3-BENZODIOXOLE-4-CARBOXYLIC ACIDnon-polymer308.34Chemie (ZT2)
5Q, R
(A, B)
waterwater18.0126Chemie (HOH)
Sequence modifications
A, B: 56 - 212 (UniProt: Q76353)
PDBExternal DatabaseDetails
Met 46-expression tag
Gly 47-expression tag
Ser 48-expression tag
Ser 49-expression tag
His 50-expression tag
His 51-expression tag
His 52-expression tag
His 53-expression tag
His 54-expression tag
His 55-expression tag
Ser 56Cys 56engineered mutation
Asp 139Phe 139engineered mutation
His 185Phe 185engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight36791.7
Non-Polymers*Number of molecules14
Total formula weight2045.7
All*Total formula weight38837.4
*Water molecules are not included.

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PDB entries from 2025-12-24

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