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3X1S

Crystal structure of the nucleosome core particle

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Histone H3.1polymer13515306.02UniProt (P68431)
Pfam (PF00125)
Homo sapiens (human)Histone H3/a, Histone H3/b, Histone H3/c, Histone H3/d, Histone H3/f, Histone H3/h, Histone H3/i, Histone H3/j, Histone H3/k, Histone H3/l
2B, F
(B, F)
Histone H4polymer10211263.22UniProt (P62805)
Pfam (PF15511)
Homo sapiens (human)
3C, G
(C, G)
Histone H2A type 1-B/Epolymer12914034.42UniProt (P04908)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (human)Histone H2A.2, Histone H2A/a, Histone H2A/m
4D, H
(D, H)
Histone H2B type 1-Bpolymer12513850.12UniProt (P33778)
Pfam (PF00125)
Homo sapiens (human)Histone H2B.1, Histone H2B.f, H2B/f
5I, J
(I, J)
DNA (146-MER)polymer14645053.92synthetic
6K, L, M, N, O...
(D, G, I)
MANGANESE (II) IONnon-polymer54.96Chemie (MN)
7Q, R
(I, J)
CHLORIDE IONnon-polymer35.52Chemie (CL)
8S, T, U, V, W
(A, C, E, I, J)
waterwater18.011Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight199015.0
Non-Polymers*Number of molecules8
Total formula weight400.5
All*Total formula weight199415.5
*Water molecules are not included.

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PDB entries from 2025-06-11

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