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3WCV

The structure of a deoxygenated 400 kda hemoglobin provides a more accurate description of the cooperative mechanism of giant hemoglobins: CA bound form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
A1 globin chain of giant V2 hemoglobinpolymer14616368.72UniProt (S0BBU7)
Pfam (PF00042)
Lamellibrachia satsuma (Hydrothermal vent tubeworm)
2B, F
(B, F)
A2 globin chain of giant V2 hemoglobinpolymer14415951.92UniProt (S0BBR6)
Pfam (PF00042)
Lamellibrachia satsuma (Hydrothermal vent tubeworm)
3C, G
(C, G)
B2 globin chain of giant V2 hemoglobinpolymer15016519.52UniProt (S0BCU7)
Pfam (PF00042)
Lamellibrachia satsuma (Hydrothermal vent tubeworm)
4D, H
(D, H)
B1 globin chain of giant V2 hemoglobinpolymer14916228.62UniProt (S0BAP9)
Pfam (PF00042)
Lamellibrachia satsuma (Hydrothermal vent tubeworm)
5I, J
(I, J)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched1057.02In PDB
GlyTouCan (G64181RO)
6CA, EA, K, N, R...
(G, H, A, B, C...)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.58Chemie (HEM)
7DA, FA, L, O, S...
(G, H, A, B, C...)
OXYGEN MOLECULEnon-polymer32.08Chemie (OXY)
8AA, BA, M, P, Q...
(F, A, B)
CALCIUM IONnon-polymer40.16Chemie (CA)
9GA, HA, IA, JA, KA...
(A, B, C, D, E...)
waterwater18.059Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight130137.6
BranchedNumber of molecules2
Total formula weight2113.9
Non-Polymers*Number of molecules22
Total formula weight5428.4
All*Total formula weight137679.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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