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3VRA

Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor Atpenin A5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Flavoprotein subunit of complex IIpolymer64571304.12UniProt (Q33862)
Pfam (PF00890)
Pfam (PF02910)
Ascaris suum (Pig roundworm)Rhodoquinol-fumarate reductase Fp subunit
2B, F
(B, F)
Iron-sulfur subunit of succinate dehydrogenasepolymer28231674.02UniProt (O44074)
Pfam (PF13085)
Pfam (PF13534)
Ascaris suum (Pig roundworm)Rhodoquinol-fumarate reductase Ip subunit
3C, G
(C, G)
Cytochrome b-large subunitpolymer18821168.22UniProt (P92506)
Pfam (PF01127)
Ascaris suum (Pig roundworm)Rhodoquinol-fumarate reductase CybL subunit
4D, H
(D, H)
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrialpolymer15617014.92UniProt (P92507)
Pfam (PF05328)
Ascaris suum (Pig roundworm)Rhodoquinol-fumarate reductase CybS subunit, CybS, Cytochrome b558 small subunit, Succinate-ubiquinone reductase membrane anchor subunit
5I, Q
(A, E)
MALONATE IONnon-polymer102.02Chemie (MLI)
6J, R
(A, E)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
7K, S
(B, F)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.82Chemie (FES)
8L, T
(B, F)
IRON/SULFUR CLUSTERnon-polymer351.62Chemie (SF4)
9M, U
(B, F)
FE3-S4 CLUSTERnon-polymer295.82Chemie (F3S)
10N, V
(C, G)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.52Chemie (HEM)
11O, W
(C, G)
3-[(2S,4S,5R)-5,6-DICHLORO-2,4-DIMETHYL-1-OXOHEXYL]-4-HYDROXY-5,6-DIMETHOXY-2(1H)-PYRIDINONEnon-polymer366.22Chemie (AT5)
12P, X
(D, H)
L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINEnon-polymer709.92Chemie (EPH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight282322.2
Non-Polymers*Number of molecules16
Total formula weight6807.0
All*Total formula weight289129.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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