3VMM
Crystal structure of BacD, an L-amino acid dipeptide ligase from Bacillus subtilis
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Alanine-anticapsin ligase BacD | polymer | 474 | 52453.3 | 1 | UniProt (P39641) Pfam (PF13535) | Bacillus subtilis | Bacilysin synthetase, L-amino acid ligase |
| 2 | B, C (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 3 | D (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 4 | E (A) | (2S)-3-[(S)-[(1R)-1-aminoethyl](phosphonooxy)phosphoryl]-2-benzylpropanoic acid | non-polymer | 351.2 | 1 | Chemie (P0D) | |||
| 5 | F (A) | water | water | 18.0 | 147 | Chemie (HOH) |
Sequence modifications
A: 1 - 472 (UniProt: P39641)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 52453.3 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 827.0 | |
| All* | Total formula weight | 53280.3 |
