3VIP
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Beta-glucosidase | polymer | 487 | 55611.5 | 1 | UniProt (Q8T0W7) Pfam (PF00232) | Neotermes koshunensis | |
| 2 | B (A) | 2-{4-[3-(5H-dibenzo[b,f]azepin-5-yl)propyl]piperazin-1-yl}ethyl beta-D-glucopyranoside | non-polymer | 525.6 | 1 | Chemie (GOI) | |||
| 3 | C (A) | 5H-dibenzo[b,f]azepine | non-polymer | 193.2 | 1 | Chemie (ONB) | |||
| 4 | D (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 5 | E (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 6 | F, G (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 7 | H (A) | water | water | 18.0 | 640 | Chemie (HOH) |
Sequence modifications
A: 21 - 498 (UniProt: Q8T0W7)
| PDB | External Database | Details |
|---|---|---|
| Met 20 | - | expression tag |
| Asp 193 | Glu 193 | engineered mutation |
| Leu 499 | - | expression tag |
| Glu 500 | - | expression tag |
| His 501 | - | expression tag |
| His 502 | - | expression tag |
| His 503 | - | expression tag |
| His 504 | - | expression tag |
| His 505 | - | expression tag |
| His 506 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 55611.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 904.9 | |
| All* | Total formula weight | 56516.4 |
