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3VDR

Crystal structure of D-3-hydroxybutyrate dehydrogenase, prepared in the presence of the substrate D-3-hydroxybutyrate and NAD(+)

Replaces:  3EEW
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
D-3-hydroxybutyrate dehydrogenasepolymer26027118.94UniProt (D0VWQ0)
Pfam (PF00106)
Alcaligenes faecalis
2E, K
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
3F, L, U
(A, B, D)
CHLORIDE IONnon-polymer35.53Chemie (CL)
4G, M, Q, V
(A, B, C, D)
NICOTINAMIDE-ADENINE-DINUCLEOTIDEnon-polymer663.44Chemie (NAD)
5H, N, R, W
(A, B, C, D)
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDEnon-polymer665.44Chemie (NAI)
6I, O, S, X
(A, B, C, D)
(3R)-3-hydroxybutanoic acidnon-polymer104.14Chemie (3HR)
7J, P, T, Y
(A, B, C, D)
ACETOACETIC ACIDnon-polymer102.14Chemie (AAE)
8AA, BA, CA, Z
(B, C, D, A)
waterwater18.0244Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight108475.8
Non-Polymers*Number of molecules21
Total formula weight6326.8
All*Total formula weight114802.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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