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3V9Z

Crystal structure of RNase T in complex with a product ssDNA (ACC) with one Mg in the active site

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Ribonuclease Tpolymer23525719.02UniProt (P30014)
Pfam (PF00929)
Escherichia coliExoribonuclease T, RNase T
2C, D
(C, D)
DNA (5'-D(*TP*TP*AP*CP*AP*CP*C)-3')polymer72057.42
3E, G
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
4F
(A)
COBALT (II) IONnon-polymer58.91Chemie (CO)
5H, I, J, K
(A, B, C, D)
waterwater18.0632Chemie (HOH)
Sequence modifications
A, B: 1 - 215 (UniProt: P30014)
PDBExternal DatabaseDetails
Met -19-expression tag
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight55552.8
Non-Polymers*Number of molecules3
Total formula weight107.5
All*Total formula weight55660.4
*Water molecules are not included.

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PDB entries from 2025-08-06

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