3V8X
The crystal structure of transferrin binding protein A (TbpA) from Neisserial meningitidis serogroup B in complex with full length human transferrin
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Transferrin-binding protein 1 | polymer | 904 | 101213.3 | 1 | UniProt (Q9K0U9) Pfam (PF07715) Pfam (PF00593) In PDB | Neisseria meningitidis serogroup B | |
2 | B | Serotransferrin | polymer | 698 | 77153.9 | 1 | UniProt (P02787) Pfam (PF00405) In PDB | Homo sapiens (human) | Transferrin, Beta-1 metal-binding globulin, Siderophilin |
3 | C | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1932.7 | 1 | In PDB GlyTouCan (G98736SM) | |||
4 | D | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1770.6 | 1 | In PDB GlyTouCan (G74608QW) | |||
5 | A | (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | non-polymer | 306.4 | 2 | Chemie (C8E) | |||
6 | water | water | 18.0 | 204 | Chemie (HOH) |
Sequence modifications
A: 25 - 915 (UniProt: Q9K0U9)
B: -18 - 679 (UniProt: P02787)
PDB | External Database | Details |
---|---|---|
Met 12 | - | expression tag |
Asp 13 | - | expression tag |
Ile 14 | - | expression tag |
His 15 | - | expression tag |
His 16 | - | expression tag |
His 17 | - | expression tag |
His 18 | - | expression tag |
His 19 | - | expression tag |
His 20 | - | expression tag |
His 21 | - | expression tag |
His 22 | - | expression tag |
His 23 | - | expression tag |
His 24 | - | expression tag |
Val 435 | Ile 435 | variant |
Tyr 913 | Met 913 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Val 429 | Ile 448 | variant |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 178367.2 | |
Branched | Number of molecules | 2 |
Total formula weight | 3703.3 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 612.9 | |
All* | Total formula weight | 182683.5 |