3V8Q
Crystal structure of NAD kinase 1 H223E mutant from Listeria monocytogenes in complex with 5'-amino-5'-deoxyadenosine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Probable inorganic polyphosphate/ATP-NAD kinase 1 | polymer | 272 | 31036.2 | 1 | UniProt (Q8Y8D7) Pfam (PF01513) Pfam (PF20143) | Listeria monocytogenes | Poly(P)/ATP NAD kinase 1 |
| 2 | B (A) | 5'-amino-5'-deoxyadenosine | non-polymer | 266.3 | 1 | Chemie (5N5) PubChem (21822368) PubChem (57061669) PubChem (57143957) PubChem (84392) PubChem (59620954) PubChem (11032790) PubChem (266234) PubChem (92131953) PubChem (92233337) PubChem (92233338) PubChem (92233339) PubChem (92854875) PubChem (9816781) PubChem (14102577) PubChem (171699378) | |||
| 3 | C (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) PubChem (753) | |||
| 4 | D (A) | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) PubChem (311) | |||
| 5 | E (A) | water | water | 18.0 | 106 | Chemie (HOH) |
Sequence modifications
A: 1 - 264 (UniProt: Q8Y8D7)
| PDB | External Database | Details |
|---|---|---|
| Glu 223 | His 223 | engineered mutation |
| Leu 265 | - | expression tag |
| Glu 266 | - | expression tag |
| His 267 | - | expression tag |
| His 268 | - | expression tag |
| His 269 | - | expression tag |
| His 270 | - | expression tag |
| His 271 | - | expression tag |
| His 272 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 31036.2 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 550.5 | |
| All* | Total formula weight | 31586.7 |
