3V2W
Crystal Structure of a Lipid G protein-Coupled Receptor at 3.35A
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Sphingosine 1-phosphate receptor 1, Lysozyme chimera | polymer | 520 | 58973.2 | 1 | UniProt (P21453) UniProt (P00720) Pfam (PF00001) Pfam (PF00959) In PDB | Homo sapiens (Human) | S1P1,Endothelial differentiation G-protein coupled receptor 1,Sphingosine 1-phosphate receptor Edg-1,S1P receptor Edg-1,Lysis protein,Lysozyme,Muramidase |
2 | A | {(3R)-3-amino-4-[(3-hexylphenyl)amino]-4-oxobutyl}phosphonic acid | non-polymer | 342.4 | 1 | Chemie (ML5) | |||
3 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
A: 2 - 231 (UniProt: P21453)
A: 1002 - 1161 (UniProt: P00720)
A: 245 - 326 (UniProt: P21453)
PDB | External Database | Details |
---|---|---|
Met -17 | - | expression tag |
Lys -16 | - | expression tag |
Thr -15 | - | expression tag |
Ile -14 | - | expression tag |
Ile -13 | - | expression tag |
Ala -12 | - | expression tag |
Leu -11 | - | expression tag |
Ser -10 | - | expression tag |
Tyr -9 | - | expression tag |
Ile -8 | - | expression tag |
Phe -7 | - | expression tag |
Cys -6 | - | expression tag |
Leu -5 | - | expression tag |
Val -4 | - | expression tag |
Phe -3 | - | expression tag |
Ala -2 | - | expression tag |
Gly -1 | - | expression tag |
Ala 0 | - | expression tag |
Pro 1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 1012 | Arg 12 | conflict |
Thr 1054 | Cys 54 | engineered mutation |
Ala 1097 | Cys 97 | engineered mutation |
Arg 1137 | Ile 137 | conflict |
PDB | External Database | Details |
---|---|---|
- | Lys 250 | see remark 999 |
Asn 251 | Ser 251 | see remark 999 |
Val 252 | Leu 252 | see remark 999 |
Gly 327 | - | expression tag |
Arg 328 | - | expression tag |
Pro 329 | - | expression tag |
Leu 330 | - | expression tag |
Glu 331 | - | expression tag |
Val 332 | - | expression tag |
Leu 333 | - | expression tag |
Phe 334 | - | expression tag |
Gln 335 | - | expression tag |
Gly 336 | - | expression tag |
Pro 337 | - | expression tag |
His 338 | - | expression tag |
His 339 | - | expression tag |
His 340 | - | expression tag |
His 341 | - | expression tag |
His 342 | - | expression tag |
His 343 | - | expression tag |
His 344 | - | expression tag |
His 345 | - | expression tag |
His 346 | - | expression tag |
His 347 | - | expression tag |
Asp 348 | - | expression tag |
Tyr 349 | - | expression tag |
Lys 350 | - | expression tag |
Asp 351 | - | expression tag |
Asp 352 | - | expression tag |
Asp 353 | - | expression tag |
Asp 354 | - | expression tag |
Lys 355 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 58973.2 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 563.6 | |
All* | Total formula weight | 59536.7 |