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3V0N

Crystal structure of the Fucosylgalactoside alpha N-acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with a novel UDP-GalNAc derived inhibitor (3GW and 4GW)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Histo-blood group ABO system transferasepolymer29834654.02UniProt (P16442)
Pfam (PF03414)
Homo sapiens (human)Fucosylglycoprotein 3-alpha-galactosyltransferase, Fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase, Glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase, Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, Histo-blood group A transferase, A transferase, Histo-blood group B transferase, B transferase, NAGAT, Fucosylglycoprotein alpha-N-acetylgalactosaminyltransferase soluble form
2C, H
(A, B)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
3D, J
(A, B)
5-(5-formylthiophen-2-yl)uridine 5'-(trihydrogen diphosphate)non-polymer514.32Chemie (4GW)
4E, K
(A, B)
GLYCEROLnon-polymer92.12Chemie (GOL)
5F, G, L
(A, B)
SULFATE IONnon-polymer96.13Chemie (SO4)
6I
(B)
5-(5-formylthiophen-2-yl)uridine-5'(2-(acetylamino)-2-deoxy-alpha-D-galactosyl)-diphosphatenon-polymer717.51Chemie (3GW)
7M, N
(A, B)
waterwater18.0546Chemie (HOH)
Sequence modifications
A, B: 64 - 354 (UniProt: P16442)
PDBExternal DatabaseDetails
Met 57-expression tag
Ala 58-expression tag
Ile 59-expression tag
Gly 60-expression tag
Glu 61-expression tag
Phe 62-expression tag
Met 63-expression tag
Gly 266Leu 266engineered mutation
Ala 268Gly 268engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight69308.0
Non-Polymers*Number of molecules10
Total formula weight2328.3
All*Total formula weight71636.3
*Water molecules are not included.

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PDB entries from 2024-11-13

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