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3UT9

Crystal Structure of Nucleosome Core Particle Assembled with a Palindromic Widom '601' Derivative (NCP-601L)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, EHistone H3.2polymer13515303.92UniProt (P84233)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)
2B, FHistone H4polymer10211263.22UniProt (P62799)
Pfam (PF15511)
In PDB
Xenopus laevis (African clawed frog)
3C, GHistone H2Apolymer12913978.22UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
In PDB
Xenopus laevis (African clawed frog)
4D, HHistone H2B 1.1polymer12513848.12UniProt (P02281)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)H2B1.1
5I145-mer DNApolymer14544761.51
6J145-mer DNApolymer14544752.51
7C, GCHLORIDE IONnon-polymer35.52Chemie (CL)
8I, J, EMANGANESE (II) IONnon-polymer54.929Chemie (MN)
9I, JPOTASSIUM IONnon-polymer39.12Chemie (K)
10waterwater18.0140Chemie (HOH)
Sequence modifications
A, E: 1 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103SEE REMARK 999
D, H: -2 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Thr 29Ser 33SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight198301.0
Non-Polymers*Number of molecules33
Total formula weight1742.3
All*Total formula weight200043.3
*Water molecules are not included.

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PDB entries from 2024-07-17

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