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3UDM

Crystal Structure of BACE with Compound 8

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Beta-secretase 1polymer40445156.71UniProt (P56817)
Pfam (PF00026)
Homo sapiens (human)BACE, Aspartyl protease 2, ASP2, Asp 2, Beta-site amyloid precursor protein cleaving enzyme 1, Beta-site APP cleaving enzyme 1, Memapsin-2, Membrane-associated aspartic protease 2
2B
(A)
benzyl (3S,5'R)-2-oxo-1,2-dihydrospiro[indole-3,3'-pyrrolidine]-5'-carboxylatenon-polymer322.41Chemie (09A)
3C
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
4D
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
5E
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
6F
(A)
waterwater18.0277Chemie (HOH)
Sequence modifications
A: -3 - 392 (UniProt: P56817)
PDBExternal DatabaseDetails
Arg 393-expression tag
Ser 394-expression tag
His 395-expression tag
His 396-expression tag
His 397-expression tag
His 398-expression tag
His 399-expression tag
His 400-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight45156.7
Non-Polymers*Number of molecules4
Total formula weight556.0
All*Total formula weight45712.7
*Water molecules are not included.

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PDB entries from 2025-12-03

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