3UBU
Crystal structure of agkisacucetin, a GpIb-binding snaclec (snake C-type lectin) that inhibits platelet
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Agglucetin subunit alpha-1 | polymer | 131 | 14948.6 | 1 | UniProt (Q8JIV9) Pfam (PF00059) | Deinagkistrodon acutus (Hundred-pace snake) | |
| 2 | B (B) | Agglucetin subunit beta-2 | polymer | 126 | 14835.0 | 1 | UniProt (Q8AYA3) Pfam (PF00059) | Deinagkistrodon acutus (Hundred-pace snake) | Antithrombin 1 chain B |
| 3 | C (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 4 | D, E, F (B) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 5 | G, H (A, B) | water | water | 18.0 | 135 | Chemie (HOH) |
Sequence modifications
A: 1 - 131 (UniProt: Q8JIV9)
B: 1 - 126 (UniProt: Q8AYA3)
| PDB | External Database | Details |
|---|---|---|
| Ser 124 | Ala 147 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 10 | Ser 33 | conflict |
| Ser 91 | Ala 114 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 29783.6 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 372.3 | |
| All* | Total formula weight | 30155.9 |
