3TY8
Crystal Structure of C. Thermocellum PNKP Ligase Domain Apo Form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Polynucleotide 2',3'-cyclic phosphate phosphodiesterase / polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatase | polymer | 413 | 47547.3 | 2 | UniProt (A3DJ38) Pfam (PF16542) | Clostridium thermocellum | |
| 2 | C, D, G (A, B) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 3 | E, F (A, B) | D(-)-TARTARIC ACID | non-polymer | 150.1 | 2 | Chemie (TAR) | |||
| 4 | H, I (A, B) | water | water | 18.0 | 115 | Chemie (HOH) |
Sequence modifications
A, B: 479 - 870 (UniProt: A3DJ38)
| PDB | External Database | Details |
|---|---|---|
| Met 458 | - | expression tag |
| Gly 459 | - | expression tag |
| His 460 | - | expression tag |
| His 461 | - | expression tag |
| His 462 | - | expression tag |
| His 463 | - | expression tag |
| His 464 | - | expression tag |
| His 465 | - | expression tag |
| His 466 | - | expression tag |
| His 467 | - | expression tag |
| His 468 | - | expression tag |
| His 469 | - | expression tag |
| Ser 470 | - | expression tag |
| Ser 471 | - | expression tag |
| Gly 472 | - | expression tag |
| His 473 | - | expression tag |
| Ile 474 | - | expression tag |
| Glu 475 | - | expression tag |
| Gly 476 | - | expression tag |
| Arg 477 | - | expression tag |
| His 478 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 95094.6 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 576.5 | |
| All* | Total formula weight | 95671.1 |






