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3TY8

Crystal Structure of C. Thermocellum PNKP Ligase Domain Apo Form

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Polynucleotide 2',3'-cyclic phosphate phosphodiesterase / polynucleotide 5'-hydroxyl-kinase / polynucleotide 3'-phosphatasepolymer41347547.32UniProt (A3DJ38)
Pfam (PF16542)
Clostridium thermocellum
2C, D, G
(A, B)
GLYCEROLnon-polymer92.13Chemie (GOL)
3E, F
(A, B)
D(-)-TARTARIC ACIDnon-polymer150.12Chemie (TAR)
4H, I
(A, B)
waterwater18.0115Chemie (HOH)
Sequence modifications
A, B: 479 - 870 (UniProt: A3DJ38)
PDBExternal DatabaseDetails
Met 458-expression tag
Gly 459-expression tag
His 460-expression tag
His 461-expression tag
His 462-expression tag
His 463-expression tag
His 464-expression tag
His 465-expression tag
His 466-expression tag
His 467-expression tag
His 468-expression tag
His 469-expression tag
Ser 470-expression tag
Ser 471-expression tag
Gly 472-expression tag
His 473-expression tag
Ile 474-expression tag
Glu 475-expression tag
Gly 476-expression tag
Arg 477-expression tag
His 478-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight95094.6
Non-Polymers*Number of molecules5
Total formula weight576.5
All*Total formula weight95671.1
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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