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3THV

Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and ddATP-dT in Closed Conformation

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, DDNA polymerase Ipolymer59267490.32UniProt (C9RTX7)
In PDB
Geobacillus
2B, E5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(2DA))-3'polymer92659.82
3C, F5'-D(*C*AP*TP*TP*TP*GP*AP*GP*TP*CP*AP*GP*G)-3'polymer134006.62
4A, D2',3'-dideoxyadenosine triphosphatenon-polymer475.22Chemie (DDS)
5A, DMAGNESIUM IONnon-polymer24.32Chemie (MG)
6A, DSULFATE IONnon-polymer96.13Chemie (SO4)
7waterwater18.01696Chemie (HOH)
Sequence modifications
A, D: 285 - 876 (UniProt: C9RTX7)
PDBExternal DatabaseDetails
Glu 456Ala 456SEE REMARK 999
Lys 505Glu 505SEE REMARK 999
Ala 598Asp 598engineered mutation
Tyr 710Phe 710engineered mutation
His 823Arg 823SEE REMARK 999
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight148313.4
Non-Polymers*Number of molecules7
Total formula weight1287.2
All*Total formula weight149600.5
*Water molecules are not included.

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PDB entries from 2024-06-12

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