3TD5
Crystal structure of OmpA-like domain from Acinetobacter baumannii in complex with L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Outer membrane protein omp38 | polymer | 123 | 13879.5 | 8 | UniProt (Q6RYW5) Pfam (PF00691) | Acinetobacter baumannii | AbOmpA, Outer membrane protein ompA, Outer membrane protein ompAb |
| 2 | I, J, K, L, M... (I, J, K, L, M...) | peptide(L-Ala-gamma-D-Glu-m-DAP-D-Ala-D-Ala) | polymer | 5 | 532.5 | 8 | |||
| 3 | Q, R, S, T, U... (A, B, C, E, F...) | CHLORIDE ION | non-polymer | 35.5 | 6 | Chemie (CL) | |||
| 4 | AA, BA, CA, DA, EA... (E, F, G, H, I...) | water | water | 18.0 | 885 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H: 221 - 339 (UniProt: Q6RYW5)
| PDB | External Database | Details |
|---|---|---|
| Gly 217 | - | expression tag |
| Ser 218 | - | expression tag |
| His 219 | - | expression tag |
| Met 220 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 115296.2 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 212.7 | |
| All* | Total formula weight | 115508.9 |
