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3SL8

Crystal structure of the catalytic domain of PDE4D2 with compound 10o

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
cAMP-specific 3',5'-cyclic phosphodiesterase 4Dpolymer36141523.94UniProt (Q08499)
Pfam (PF00233)
Homo sapiens (human)DPDE3, PDE43
2BA, CA, DA, E, H...
(C, A, D, B)
1,2-ETHANEDIOLnon-polymer62.130Chemie (EDO)
3EA, F, FA, G, PA...
(C, A, D, B)
ZINC IONnon-polymer65.48Chemie (ZN)
4N, OA
(A, D)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
5AA, IA, T, ZA
(B, C, A, D)
3-cyclopentyl 6-ethenyl 2-[(thiophen-2-ylacetyl)amino]-4,7-dihydrothieno[2,3-c]pyridine-3,6(5H)-dicarboxylatenon-polymer460.64Chemie (JN7)
6GA, X
(C, B)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
7HA, XA
(C, D)
DIMETHYL SULFOXIDEnon-polymer78.12Chemie (DMS)
8AB, BB, CB, DB
(A, B, C, D)
waterwater18.0236Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight166095.5
Non-Polymers*Number of molecules48
Total formula weight4786.0
All*Total formula weight170881.6
*Water molecules are not included.

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PDB entries from 2025-12-17

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