3S11
Crystal structure of H5N1 influenza virus hemagglutinin, strain 437-10
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Hemagglutinin HA1 chain | polymer | 331 | 37140.8 | 3 | UniProt (Q9EA62) Pfam (PF00509) UniProt (by SIFTS) (Q9Q0U6) In PDB | Influenza A virus | |
2 | B, D, F | Hemagglutinin HA2 chain | polymer | 182 | 20937.1 | 3 | UniProt (Q9EA62) Pfam (PF00509) UniProt (by SIFTS) (Q8QPL1) In PDB | Influenza A virus | |
3 | G, I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
4 | H | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
5 | A, C, E | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
6 | A, C, E | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
7 | A | TRIS(HYDROXYETHYL)AMINOMETHANE | non-polymer | 163.2 | 1 | Chemie (TAM) | |||
8 | water | water | 18.0 | 133 | Chemie (HOH) |
Sequence modifications
A, C, E: 11 - 326 (UniProt: Q9EA62)
B, D, F: 1 - 176 (UniProt: Q9EA62)
PDB | External Database | Details |
---|---|---|
Asp 3 | - | expression tag |
Leu 4 | - | expression tag |
Gly 5 | - | expression tag |
Ser 6 | - | expression tag |
Ala 7 | - | expression tag |
Asp 8 | - | expression tag |
Pro 9 | - | expression tag |
Gly 10 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Arg 177 | - | expression tag |
Ser 178 | - | expression tag |
Leu 179 | - | expression tag |
Val 180 | - | expression tag |
Pro 181 | - | expression tag |
Arg 182 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 174233.9 | |
Branched | Number of molecules | 3 |
Total formula weight | 1435.3 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1103.1 | |
All* | Total formula weight | 176772.3 |