3QYY
A Novel Interaction Mode between a Microbial GGDEF Domain and the Bis-(3, 5 )-cyclic di-GMP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Response regulator | polymer | 167 | 18758.1 | 2 | UniProt (Q8P559) Pfam (PF00990) | Xanthomonas campestris pv. campestris | |
| 2 | C, F (A, B) | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) | non-polymer | 690.4 | 2 | Chemie (C2E) | |||
| 3 | D, G, H (A, B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
| 4 | E, I (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 5 | J, K (A, B) | water | water | 18.0 | 183 | Chemie (HOH) |
Sequence modifications
A, B: 128 - 291 (UniProt: Q8P559)
| PDB | External Database | Details |
|---|---|---|
| Ser 125 | - | expression tag |
| Asn 126 | - | expression tag |
| Ala 127 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 37516.3 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1747.8 | |
| All* | Total formula weight | 39264.1 |
