3QV4
Crystal structure of the complex of peptidoglycan recognition protein (PGRP-S) with dipeptide L-ALA D-GLU at 2.7 A resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Peptidoglycan recognition protein 1 | polymer | 171 | 19011.5 | 4 | UniProt (Q9GK12) Pfam (PF01510) | Camelus dromedarius (camel) | Peptidoglycan recognition protein short, PGRP-S |
| 2 | E (E) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 627.6 | 1 | In PDB BIRD (PRD_900017) GlyTouCan (G47362BJ) | triacetyl-beta-chitotriose | ||
| 3 | F, G, H, I, O (A, D) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 4 | J (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 5 | K (B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 6 | L (C) | ALANINE | non-polymer | 89.1 | 1 | Chemie (ALA) | |||
| 7 | M (C) | D-GLUTAMIC ACID | non-polymer | 147.1 | 1 | Chemie (DGL) | |||
| 8 | N (D) | S,R MESO-TARTARIC ACID | non-polymer | 150.1 | 1 | Chemie (SRT) | |||
| 9 | P, Q, R, S (A, B, C, D) | water | water | 18.0 | 273 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 76045.8 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 627.6 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 1015.0 | |
| All* | Total formula weight | 77688.4 |
