3QPE
Crystal structure of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with D-Galacturonate and 5-keto-4-deoxy-D-Galacturonate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Mandelate racemase/muconate lactonizing protein | polymer | 392 | 43923.2 | 4 | UniProt (D3EID5) Pfam (PF13378) In PDB | Paenibacillus sp. | |
2 | A, B, C, D | MAGNESIUM ION | non-polymer | 24.3 | 8 | Chemie (MG) | |||
3 | A | D-galacturonic acid | non-polymer | 194.1 | 1 | Chemie (DGU) | |||
4 | B, C, D | 4-deoxy-L-threo-hex-5-ulosuronic acid | non-polymer | 176.1 | 3 | Chemie (D54) | |||
5 | C | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
6 | water | water | 18.0 | 755 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 4 - 384 (UniProt: D3EID5)
PDB | External Database | Details |
---|---|---|
Met 1 | - | expression tag |
Ser 2 | - | expression tag |
Leu 3 | - | expression tag |
Glu 385 | - | expression tag |
Gly 386 | - | expression tag |
His 387 | - | expression tag |
His 388 | - | expression tag |
His 389 | - | expression tag |
His 390 | - | expression tag |
His 391 | - | expression tag |
His 392 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 175692.8 | |
Non-Polymers* | Number of molecules | 13 |
Total formula weight | 1009.0 | |
All* | Total formula weight | 176701.8 |