3QMC
Structural Basis of Selective Binding of Nonmethylated CpG Islands by the CXXC Domain of CFP1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | CpG-binding protein | polymer | 79 | 9528.0 | 1 | UniProt (Q9P0U4) Pfam (PF02008) | Homo sapiens (human) | CXXC-type zinc finger protein 1, PHD finger and CXXC domain-containing protein 1 |
2 | B (B) | 5'-D(*GP*CP*CP*AP*CP*CP*GP*CP*TP*GP*GP*C)-3' | polymer | 12 | 3624.4 | 1 | |||
3 | C (C) | 5'-D(*GP*CP*CP*AP*GP*CP*GP*GP*TP*GP*GP*C)-3' | polymer | 12 | 3704.4 | 1 | |||
4 | D, E (A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
5 | F, G, H (A, B, C) | water | water | 18.0 | 22 | Chemie (HOH) |
Sequence modifications
A: 165 - 226 (UniProt: Q9P0U4)
PDB | External Database | Details |
---|---|---|
Met 148 | - | expression tag |
His 149 | - | expression tag |
His 150 | - | expression tag |
His 151 | - | expression tag |
His 152 | - | expression tag |
His 153 | - | expression tag |
His 154 | - | expression tag |
Ser 155 | - | expression tag |
Ser 156 | - | expression tag |
Arg 157 | - | expression tag |
Glu 158 | - | expression tag |
Asn 159 | - | expression tag |
Leu 160 | - | expression tag |
Tyr 161 | - | expression tag |
Phe 162 | - | expression tag |
Gln 163 | - | expression tag |
Gly 164 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 16856.7 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 130.8 | |
All* | Total formula weight | 16987.5 |