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3QIN

Crystal Structure of HIV-1 RNase H p15 with engineered E. coli loop and pyrimidinol carboxylic acid inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Fusion protein of HIV-1 RNase H p15 with engineered E. coli looppolymer15016921.51UniProt (P04585)
UniProt (P0A7Y4)
Pfam (PF00075)
Human immunodeficiency virus type 1 group M subtype B (HIV-1)Pr160Gag-Pol,RNase HI,Ribonuclease H,RNase H
2B, C
(A)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
3D
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
4E
(A)
2-(3-bromo-4-methoxybenzyl)-5,6-dihydroxypyrimidine-4-carboxylic acidnon-polymer355.11Chemie (P1Y)
5F
(A)
waterwater18.0153Chemie (HOH)
Sequence modifications
A: 427 - 506 (UniProt: P04585)
PDBExternal DatabaseDetails
Met 426-initiating methionine
A: 79 - 102 (UniProt: P0A7Y4)
A: 517 - 561 (UniProt: P04585)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight16921.5
Non-Polymers*Number of molecules4
Total formula weight561.1
All*Total formula weight17482.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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