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3QIB

Crystal structure of the 2B4 TCR in complex with MCC/I-Ek

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
H-2 class II histocompatibility antigen, E-K alpha chainpolymer19322491.21UniProt (P04224)
Pfam (PF00993)
Pfam (PF07654)
Mus musculus (mouse)
2B
(B)
MHC class II E-beta-kpolymer20223344.91UniProt (Q31163)
Pfam (PF00969)
Pfam (PF07654)
UniProt (by SIFTS) (P04230)
Mus musculus (mouse)
3C
(C)
T-cell receptor alpha chain C regionpolymer20722807.11Pfam (PF09291)
UniProt (by SIFTS) (P01848)
Homo sapiens (human)
4D
(D)
2B4 beta chainpolymer27030288.91Mus musculus
5E
(P)
MCC peptidepolymer131393.61UniProt (P00039)Manduca sexta
6F, I
(B, C)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
7G, J
(B, C)
alpha-L-fucopyranosenon-polymer164.22Chemie (FUC)
8H, L, M, N, O...
(B, C, D)
DI(HYDROXYETHYL)ETHERnon-polymer106.17Chemie (PEG)
9K
(C)
beta-D-mannopyranosenon-polymer180.21Chemie (BMA)
10R, S, T, U, V
(A, B, C, D, P)
waterwater18.0106Chemie (HOH)
Sequence modifications
A: 1 - 191 (UniProt: P04224)
PDBExternal DatabaseDetails
Ser 192-expression tag
Arg 193-expression tag
B: 3 - 198 (UniProt: Q31163)
PDBExternal DatabaseDetails
Gly -3-expression tag
Ser -2-expression tag
Gly -1-expression tag
Gly 0-expression tag
Gly 1-expression tag
Gly 2-expression tag
P: 2 - 13 (UniProt: P00039)
PDBExternal DatabaseDetails
Gly 14-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight100325.8
Non-Polymers*Number of molecules12
Total formula weight1693.7
All*Total formula weight102019.6
*Water molecules are not included.

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PDB entries from 2025-07-02

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