3QIB
Crystal structure of the 2B4 TCR in complex with MCC/I-Ek
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | H-2 class II histocompatibility antigen, E-K alpha chain | polymer | 193 | 22491.2 | 1 | UniProt (P04224) Pfam (PF00993) Pfam (PF07654) | Mus musculus (mouse) | |
2 | B (B) | MHC class II E-beta-k | polymer | 202 | 23344.9 | 1 | UniProt (Q31163) Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (P04230) | Mus musculus (mouse) | |
3 | C (C) | T-cell receptor alpha chain C region | polymer | 207 | 22807.1 | 1 | Pfam (PF09291) UniProt (by SIFTS) (P01848) | Homo sapiens (human) | |
4 | D (D) | 2B4 beta chain | polymer | 270 | 30288.9 | 1 | Mus musculus | ||
5 | E (P) | MCC peptide | polymer | 13 | 1393.6 | 1 | UniProt (P00039) | Manduca sexta | |
6 | F, I (B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
7 | G, J (B, C) | alpha-L-fucopyranose | non-polymer | 164.2 | 2 | Chemie (FUC) | |||
8 | H, L, M, N, O... (B, C, D) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 7 | Chemie (PEG) | |||
9 | K (C) | beta-D-mannopyranose | non-polymer | 180.2 | 1 | Chemie (BMA) | |||
10 | R, S, T, U, V (A, B, C, D, P) | water | water | 18.0 | 106 | Chemie (HOH) |
Sequence modifications
A: 1 - 191 (UniProt: P04224)
B: 3 - 198 (UniProt: Q31163)
P: 2 - 13 (UniProt: P00039)
PDB | External Database | Details |
---|---|---|
Ser 192 | - | expression tag |
Arg 193 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Gly -1 | - | expression tag |
Gly 0 | - | expression tag |
Gly 1 | - | expression tag |
Gly 2 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 14 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 100325.8 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 1693.7 | |
All* | Total formula weight | 102019.6 |