3Q3J
Crystal structure of plexin A2 RBD in complex with Rnd1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Plexin-A2 | polymer | 112 | 13007.9 | 1 | UniProt (O75051) Pfam (PF20170) | Homo sapiens (human) | Semaphorin receptor OCT |
| 2 | B (B) | Rho-related GTP-binding protein Rho6 | polymer | 214 | 24089.5 | 1 | UniProt (Q92730) Pfam (PF00071) | Homo sapiens (human) | Rho family GTPase 1, Rnd1 |
| 3 | C, D, G, H, I... (A, B) | UNKNOWN ATOM OR ION | non-polymer | 9 | Chemie (UNX) | ||||
| 4 | E (B) | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | non-polymer | 522.2 | 1 | Chemie (GNP) | |||
| 5 | F (B) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 6 | N, O (A, B) | water | water | 18.0 | 38 | Chemie (HOH) |
Sequence modifications
A: 1490 - 1600 (UniProt: O75051)
B: 5 - 200 (UniProt: Q92730)
| PDB | External Database | Details |
|---|---|---|
| Gly 1489 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| Ser -6 | - | expression tag |
| Ser -5 | - | expression tag |
| Gly -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Glu -2 | - | expression tag |
| Asn -1 | - | expression tag |
| Leu 0 | - | expression tag |
| Tyr 1 | - | expression tag |
| Phe 2 | - | expression tag |
| Gln 3 | - | expression tag |
| Gly 4 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 37097.4 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 546.5 | |
| All* | Total formula weight | 37643.9 |
