3Q38
Crystal structure of P domain from norwalk virus strain vietnam 026 in complex with HBGA type B (triglycan)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Capsid protein | polymer | 319 | 34805.0 | 2 | UniProt (Q5F4T5) Pfam (PF08435) | Norwalk virus | |
| 2 | C (C) | alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose | branched | 488.4 | 1 | In PDB GlyTouCan (G47548GA) | |||
| 3 | D, E, F, G, H... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 19 | Chemie (EDO) | |||
| 4 | AA, BA, N, O, Y... (B, A) | IMIDAZOLE | non-polymer | 69.1 | 6 | Chemie (IMD) | |||
| 5 | CA, DA (A, B) | water | water | 18.0 | 825 | Chemie (HOH) |
Sequence modifications
A, B: 224 - 538 (UniProt: Q5F4T5)
| PDB | External Database | Details |
|---|---|---|
| Gly 220 | - | expression tag |
| Pro 221 | - | expression tag |
| Gly 222 | - | expression tag |
| Ser 223 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 69609.9 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 488.4 | |
| Non-Polymers* | Number of molecules | 25 |
| Total formula weight | 1593.8 | |
| All* | Total formula weight | 71692.1 |
