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3PW4

Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dATP

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA polymerase IVpolymer34739848.41UniProt (Q97W02)
Pfam (PF00817)
Pfam (PF11798)
Pfam (PF11799)
Sulfolobus solfataricus (Sulfolobu solfataricus)Pol IV
2B
(B)
DNA (5'-D(*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3')polymer154455.91synthetic construct
3C
(C)
DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3')polymer134096.71synthetic construct
4D
(A)
2'-DEOXYADENOSINE 5'-TRIPHOSPHATEnon-polymer491.21Chemie (DTP)
5E, F, G
(A)
CALCIUM IONnon-polymer40.13Chemie (CA)
6H
(B)
8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1non-polymer330.31Chemie (AFN)
7I, J, K
(A, B, C)
waterwater18.071Chemie (HOH)
Sequence modifications
A: 2 - 342 (UniProt: Q97W02)
PDBExternal DatabaseDetails
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
His 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight48401.0
Non-Polymers*Number of molecules5
Total formula weight941.7
All*Total formula weight49342.7
*Water molecules are not included.

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PDB entries from 2024-12-25

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