3PUQ
CEKDM7A from C.Elegans, complex with alpha-KG
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, C) | Lysine-specific demethylase 7 homolog | polymer | 528 | 61945.5 | 2 | UniProt (Q9GYI0) Pfam (PF02373) Pfam (PF17811) | Caenorhabditis elegans (nematode) | LYSINE DEMETHYLASE, ceKDM7A, PHD finger protein 8 homolog, PHF8 homolog |
| 2 | C, H (A, C) | FE (II) ION | non-polymer | 55.8 | 2 | Chemie (FE2) | |||
| 3 | D, E, I, J (A, C) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 4 | F, K (A, C) | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 2 | Chemie (AKG) | |||
| 5 | G, L (A, C) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 6 | M, N (A, C) | water | water | 18.0 | 823 | Chemie (HOH) |
Sequence modifications
A, C: 188 - 711 (UniProt: Q9GYI0)
| PDB | External Database | Details |
|---|---|---|
| Glu 184 | - | expression tag |
| Phe 185 | - | expression tag |
| His 186 | - | expression tag |
| Met 187 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 123891.0 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 849.7 | |
| All* | Total formula weight | 124740.7 |
