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3POT

Structural analysis of a Ni(III)-methyl species in methyl-coenzyme M reductase from Methanothermobacter marburgensis

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, DMethyl-coenzyme M reductase I subunit alphapolymer55060639.72UniProt (P11558)
Pfam (PF02745)
Pfam (PF02249)
In PDB
Methanothermobacter marburgensis (Methanobacterium thermoautotrophicum)MCR I alpha, Coenzyme-B sulfoethylthiotransferase alpha
2B, EMethyl-coenzyme M reductase I subunit betapolymer44347279.72UniProt (P11560)
Pfam (PF02783)
Pfam (PF02241)
In PDB
Methanothermobacter marburgensis (Methanobacterium thermoautotrophicum)MCR I beta, Coenzyme-B sulfoethylthiotransferase beta
3C, FMethyl-coenzyme M reductase I subunit gammapolymer24928797.22UniProt (P11562)
Pfam (PF02240)
In PDB
Methanothermobacter marburgensis (Methanobacterium thermoautotrophicum)MCR I gamma, Coenzyme-B sulfoethylthiotransferase gamma
4E, F, A, B, C...MAGNESIUM IONnon-polymer24.312Chemie (MG)
5A, DFACTOR 430non-polymer906.62Chemie (F43)
6A, D1-THIOETHANESULFONIC ACIDnon-polymer142.22Chemie (COM)
7A, DO-phosphono-N-(6-sulfanylhexanoyl)-L-threoninenon-polymer329.32Chemie (TXZ)
8A, DCoenzyme Bnon-polymer343.32Chemie (TP7)
9A, DIodomethanenon-polymer141.92Chemie (06C)
10APOTASSIUM IONnon-polymer39.11Chemie (K)
11D1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
12waterwater18.02602Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight273433.1
Non-Polymers*Number of molecules24
Total formula weight4119.5
All*Total formula weight277552.7
*Water molecules are not included.

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PDB entries from 2024-08-14

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