3PDO
Crystal Structure of HLA-DR1 with CLIP102-120
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | HLA class II histocompatibility antigen, DR alpha chain | polymer | 193 | 22353.2 | 1 | UniProt (P01903) Pfam (PF00993) Pfam (PF07654) | Homo sapiens (human) | MHC class II antigen DRA |
| 2 | B (B) | HLA class II histocompatibility antigen, DRB1-1 beta chain | polymer | 199 | 23087.8 | 1 | UniProt (P04229) Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (P01911) | Homo sapiens (human) | MHC class II antigen DRB1*1, DR-1, DR1 |
| 3 | C (C) | HLA class II histocompatibility antigen gamma chain | polymer | 19 | 2146.8 | 1 | UniProt (P04233) | Homo sapiens | HLA-DR antigens-associated invariant chain, Ia antigen-associated invariant chain, Ii, p33 |
| 4 | D, E (A, B) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 5 | F (B) | FORMIC ACID | non-polymer | 46.0 | 1 | Chemie (FMT) | |||
| 6 | G, H, I (A, B, C) | water | water | 18.0 | 320 | Chemie (HOH) |
Sequence modifications
A: 1 - 192 (UniProt: P01903)
B: 1 - 198 (UniProt: P04229)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 47587.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 230.2 | |
| All* | Total formula weight | 47818.0 |
