3PA2
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with HBGA type Ley
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Capsid protein | polymer | 319 | 34805.0 | 2 | UniProt (Q5F4T5) Pfam (PF08435) | Norwalk virus | |
| 2 | C (C) | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 675.6 | 1 | In PDB BIRD (PRD_900054) GlyTouCan (G00052MO) | Lewis Y antigen, beta anomer | ||
| 3 | D, E, F, G, H... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 22 | Chemie (EDO) | |||
| 4 | S (A) | IMIDAZOLE | non-polymer | 69.1 | 1 | Chemie (IMD) | |||
| 5 | AA, BA (A, B) | water | water | 18.0 | 765 | Chemie (HOH) |
Sequence modifications
A, B: 224 - 538 (UniProt: Q5F4T5)
| PDB | External Database | Details |
|---|---|---|
| Gly 220 | - | expression tag |
| Pro 221 | - | expression tag |
| Gly 222 | - | expression tag |
| Ser 223 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 69609.9 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 675.6 | |
| Non-Polymers* | Number of molecules | 23 |
| Total formula weight | 1434.6 | |
| All* | Total formula weight | 71720.1 |
