3P5G
Structure of the carbohydrate-recognition domain of human Langerin with Blood group B trisaccharide (Gal alpha1-3(Fuc alpha1-2)Gal)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | C-type lectin domain family 4 member K | polymer | 136 | 15577.4 | 4 | UniProt (Q9UJ71) Pfam (PF00059) | Homo sapiens (human) | Langerin |
| 2 | E (E) | alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose | branched | 488.4 | 1 | In PDB GlyTouCan (G47548GA) | |||
| 3 | F (F) | alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose | branched | 488.4 | 1 | In PDB GlyTouCan (G11065GA) | |||
| 4 | G, H, J, L (A, B, C, D) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
| 5 | I, K (C, D) | alpha-L-fucopyranose | non-polymer | 164.2 | 2 | Chemie (FUC) | |||
| 6 | M, N, O, P (A, B, C, D) | water | water | 18.0 | 816 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 193 - 328 (UniProt: Q9UJ71)
| PDB | External Database | Details |
|---|---|---|
| Ala 278 | Val 278 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 62309.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 976.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 488.6 | |
| All* | Total formula weight | 63775.0 |
