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3OKD

Crystal structure of S25-39 in complex with Kdo

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
S25-39 Fab (IgG1k) light chainpolymer21924182.81Mus musculus
2B
(B)
S25-39 Fab (IgG1k) heavy chainpolymer22223936.81Mus musculus
3C, D
(A, B)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
PubChem (8117)
4E
(B)
3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acidnon-polymer238.21Chemie (KDO)
PubChem (445569)
PubChem (10082895)
PubChem (10243263)
PubChem (10354174)
PubChem (10857507)
PubChem (11736546)
PubChem (11776331)
PubChem (12775606)
PubChem (12775607)
PubChem (12775609)
PubChem (177608129)
PubChem (46936712)
PubChem (54120673)
PubChem (13990111)
PubChem (51351682)
PubChem (4636210)
PubChem (54120672)
PubChem (12775611)
PubChem (59879037)
PubChem (86308775)
PubChem (91130708)
PubChem (92131880)
PubChem (93477607)
PubChem (101259516)
PubChem (102104650)
PubChem (102502503)
PubChem (117731569)
PubChem (123948409)
PubChem (124526013)
PubChem (126544103)
PubChem (135037314)
PubChem (135040540)
PubChem (135041481)
PubChem (135070235)
PubChem (135081089)
PubChem (140373577)
PubChem (146415574)
PubChem (155539835)
PubChem (163811278)
PubChem (164803663)
PubChem (174067243)
5F
(B)
ZINC IONnon-polymer65.41Chemie (ZN)
6G, H
(A, B)
waterwater18.0592Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight48119.7
Non-Polymers*Number of molecules4
Total formula weight515.8
All*Total formula weight48635.5
*Water molecules are not included.

251801

PDB entries from 2026-04-08

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