3OE8
Crystal structure of the CXCR4 chemokine receptor in complex with a small molecule antagonist IT1t in P1 spacegroup
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | C-X-C chemokine receptor type 4, Lysozyme Chimera | polymer | 502 | 56962.8 | 3 | UniProt (P61073) UniProt (P00720) Pfam (PF12109) Pfam (PF00001) Pfam (PF00959) In PDB | Homo Sapiens | CXC-R4, CXCR-4, Stromal cell-derived factor 1 receptor, SDF-1 receptor, Fusin, Leukocyte-derived seven transmembrane domain receptor, LESTR, LCR1, FB22, NPYRL, HM89, Lysis protein, Muramidase, Endolysin |
2 | A, B, C | (6,6-dimethyl-5,6-dihydroimidazo[2,1-b][1,3]thiazol-3-yl)methyl N,N'-dicyclohexylimidothiocarbamate | non-polymer | 406.7 | 3 | Chemie (ITD) |
Sequence modifications
A, B, C: 2 - 229 (UniProt: P61073)
A, B, C: 1002 - 1161 (UniProt: P00720)
A, B, C: 230 - 319 (UniProt: P61073)
PDB | External Database | Details |
---|---|---|
Asp -9 | - | expression tag |
Tyr -8 | - | expression tag |
Lys -7 | - | expression tag |
Asp -6 | - | expression tag |
Asp -5 | - | expression tag |
Asp -4 | - | expression tag |
Asp -3 | - | expression tag |
Ala -2 | - | expression tag |
Gly -1 | - | expression tag |
Ala 0 | - | expression tag |
Pro 1 | - | expression tag |
Trp 125 | Leu 125 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Thr 1054 | Cys 1054 | engineered mutation |
Ala 1097 | Cys 1097 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly 900 | - | linker |
Ser 901 | - | linker |
Gly 1200 | - | linker |
Ser 1201 | - | linker |
Gly 320 | - | expression tag |
Arg 321 | - | expression tag |
Pro 322 | - | expression tag |
Leu 323 | - | expression tag |
Glu 324 | - | expression tag |
Val 325 | - | expression tag |
Leu 326 | - | expression tag |
Phe 327 | - | expression tag |
Gln 328 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 170888.4 | |
Non-Polymers* | Number of molecules | 3 |
Total formula weight | 1220.0 | |
All* | Total formula weight | 172108.4 |