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3NO3

Crystal structure of a glycerophosphodiester phosphodiesterase (BDI_0402) from Parabacteroides distasonis ATCC 8503 at 1.89 A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
glycerophosphodiester phosphodiesterasepolymer23827832.51UniProt (A6L916)
Pfam (PF03009)
Parabacteroides distasonis
2B, C
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
3D
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
4E
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
5F
(A)
waterwater18.0298Chemie (HOH)
Sequence modifications
A: 22 - 258 (UniProt: A6L916)
PDBExternal DatabaseDetails
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight27832.5
Non-Polymers*Number of molecules4
Total formula weight246.8
All*Total formula weight28079.3
*Water molecules are not included.

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PDB entries from 2024-11-06

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